Research Interests
- Bioinformatics and computational genomics
- Next-generation sequencing and sequencing quality control
- RNA-seq and transcriptomics
- Metagenomics and microbiome analysis
- Comparative and microbial genomics
- Molecular biology and microbiology
- Genome evolution, DNA repair, and genome stability
- Reproducible bioinformatics workflows and biological data analysis
Selected Projects
Lactobacilli oxidative-stress genomics
Comparative genomics of oxidative-stress response, DNA-repair systems, and genome-level variation in probiotic Lactobacillus species.
Framework for Mapping
A reproducible computational framework for analysis and mapping of gut microbial taxa across large microbiome datasets.